STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68815.1SAM-dependent O-methyltransferase, AdoMet_MTases superfamily. (266 aa)    
Predicted Functional Partners:
AFU67462.1
Prenyltransferase, UbiA superfamily.
 
   
 0.750
AFU68572.1
TPR domain containing protein.
 
     0.694
AFU69052.1
Protein sorting transpeptidase, exosortase family.
  
     0.687
AFU69111.1
Glycosyltransferase, putative.
  
     0.686
AFU69053.1
Exosortase F-associated protein.
  
     0.668
AFU68579.1
Hypothetical protein.
  
     0.656
AFU68814.1
ABC -type transporter-like protein possessing duplicated ATPase domains Uup-like protein.
       0.644
AFU69785.1
Hypothetical protein.
 
     0.634
AFU68816.1
Hypothetical protein.
       0.623
AFU68015.1
DUF4271 superfamily protein.
 
     0.622
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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