STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68931.1DUF3332 superfamily protein. (187 aa)    
Predicted Functional Partners:
AFU69108.1
Hypothetical protein.
  
     0.642
AFU69107.1
TonB-dependent outer membrane receptor protein, TonB_Xanth_Caul family.
  
     0.610
AFU67741.1
Abortive phage infection protein (CAAX terminal protease).
  
     0.574
AFU68930.1
Flavoprotein, NADB_Rossmann superfamily.
       0.563
AFU68353.1
Hypothetical protein.
  
     0.562
AFU67742.1
Two-component response regulator, LytR/AlgR family.
  
     0.516
AFU70393.1
ArsC family protein; Belongs to the ArsC family.
  
     0.505
AFU70018.1
LETM1-like domain protein.
  
     0.499
AFU68932.1
Secreted fungalysin-like metallopeptidase.
       0.480
AFU67836.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.