STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU69573.1Aminopeptidase, peptidase M1 family. (692 aa)    
Predicted Functional Partners:
AFU67308.1
beta-alanyl-L-histidine (L-carnosine) dipeptidase PepD.
     
 0.902
AFU67291.1
Gamma-glutamyltranspeptidase Ggt.
     
 0.901
AFU68451.1
Gamma-glutamyltranspeptidase Ggt.
     
 0.901
glyA
Glycine hydroxymethyltransferase GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.825
AFU70208.1
Cystathionine gamma-lyase MetC.
   
 
 0.804
AFU67419.1
Aspartate aminotransferase.
   
 
  0.801
AFU69436.1
Aspartate aminotransferase.
   
 
  0.801
AFU68274.1
O-acetylhomoserine sulfhydrylase/O-succinylhomoserine sulfhydrylase.
     
  0.800
AFU70180.1
Cysteine dioxygenase type I.
     
  0.800
AFU69217.1
Branched-chain amino acid permease BrnQ-like protein.
  
     0.647
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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