STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU69583.1Ketoglutarate semialdehyde dehydrogenase. (527 aa)    
Predicted Functional Partners:
AFU69581.1
D-amino acid oxidase.
 
  
 0.918
AFU69582.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
 
 
 
 0.913
AFU69584.1
1-pyrroline-4-hydroxy-2-carboxylate (HCP) deaminase; Belongs to the DapA family.
 
  
 0.849
AFU69207.1
2-oxoglutarate dehydrogenase complex, E1 component SucA.
   
 
 0.830
AFU69585.1
Transcriptional regulator, AraC family.
 
  
 0.829
AFU69258.1
Isocitrate dehydrogenase Icd.
   
 0.822
AFU69985.1
Isocitrate dehydrogenase (NADP+) Icd; Belongs to the monomeric-type IDH family.
   
 
  0.803
AFU69580.1
L-serine dehydratase, fused alpha and beta subunits SdaAB; Belongs to the iron-sulfur dependent L-serine dehydratase family.
 
  
 0.537
AFU69624.1
Glutamate synthase (NADPH) large chain GltS.
  
  
 0.405
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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