STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU69847.1Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (484 aa)    
Predicted Functional Partners:
AFU67475.1
L-proline dehydrogenase.
 
  
 0.639
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.597
AFU69845.1
Glycosyltransferase, GTA_type superfamily.
  
    0.571
AFU67683.1
DUF1343 superfamily protein.
     0.522
AFU70133.1
Glucokinase or N-acetyl-D-glucosamine kinase, putative.
 
     0.506
AFU70071.1
Membrane protein, rhomboid family.
  
     0.434
AFU68835.1
DUF3109 superfamily protein.
  
     0.421
AFU69844.1
Branched-chain alpha-keto acid dehydrogenase, dihydrolipoamide acyltransferase (E2 subunit).
       0.412
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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