STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU69882.1Anti-sigma factor FecR-like protein. (390 aa)    
Predicted Functional Partners:
AFU69748.1
anti-FecI sigma factor FecR-like protein.
  
  
  0.976
AFU68226.1
Iron siderophore anti-FecI sigma factor FecR.
  
  
 
0.929
AFU69883.1
RNA polymerase ECF-type sigma factor, sigma70 superfamily; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.881
AFU69881.1
TonB-dependent outer membrane receptor protein.
 
    0.842
AFU70175.1
TonB-dependent outer membrane receptor protein.
 
 
 0.622
AFU70104.1
Nutrient-binding outer membrane protein, SusD family.
  
     0.590
AFU68225.1
RNA polymerase ECF-type sigma factor, sigma-70 family.
 
 
 0.587
AFU67102.1
TonB-dependent outer membrane receptor protein.
  
    0.521
AFU68452.1
TonB-dependent outer membrane receptor, SusC/RagA family.
  
    0.516
AFU70105.1
TonB-dependent outer membrane receptor/channel protein.
  
    0.503
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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