STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU69898.1DUF4199 superfamily protein. (171 aa)    
Predicted Functional Partners:
AFU69896.1
Phosphoglucomutase/phosphomannomutase.
       0.793
AFU69897.1
Dolichol-phosphate mannose (DPM) synthase family protein.
       0.786
AFU69895.1
Lipid A export ATP-type exporter binding/permease components MsbA.
       0.734
AFU69894.1
RNA polymerase ECF-type sigma factor, sigma70 superfamily; Belongs to the sigma-70 factor family. ECF subfamily.
       0.722
AFU69892.1
Hypothetical protein.
       0.628
AFU69893.1
Hypothetical protein.
       0.628
AFU69890.1
Secreted endonuclease I.
       0.554
AFU69891.1
tRNA/small subunit rRNA cytosine -C5 methyltransferase RsmB; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.554
AFU68037.1
acyl-ACP thioesterase.
  
     0.523
AFU69749.1
TonB-dependent outer membrane receptor protein.
  
     0.515
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.