STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU70100.1Succinate semialdehyde dehydrogenase, NAD+-dependent; C-terminal end missing due to nonsense mutation. (388 aa)    
Predicted Functional Partners:
AFU68845.1
Succinate dehydrogenase flavoprotein subunit SdhA.
   
 0.927
AFU68846.1
Succinate dehydrogenase iron-sulfur protein SdhB; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.915
AFU68502.1
Aldolase, pyruvate_kinase superfamily; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.907
AFU70044.1
Succinate-semialdehyde dehydrogenase (NADP+) GabD.
  
  
 
0.906
AFU68844.1
Succinate dehydrogenase cytochrome b subunit SdhC.
   
 
  0.900
AFU67957.1
Citrate synthase GltA; Belongs to the citrate synthase family.
  
 0.869
pckA
Phosphoenolpyruvate carboxykinase PckA; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
  
 
 0.867
fumC
Fumarate hydratase FumC; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.830
AFU69207.1
2-oxoglutarate dehydrogenase complex, E1 component SucA.
   
 
 0.830
mdh
Malate dehydrogenase Mdh; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 0.827
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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