STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU70117.1VCBS repeat domain protein (); Secretion domain removed by transposition. (488 aa)    
Predicted Functional Partners:
AFU70566.1
Secreted adhesin with an integrin alpha (FG-GAP repeat) and Por secretion system C-terminal sorting domains.
  
     0.773
AFU70567.1
TPR domain protein.
  
    0.769
AFU67994.1
TonB-dependent outer membrane receptor protein, RagA/SusC family.
 
     0.763
AFU67995.1
Outer membrane nutrient binding protein, SusD family.
  
     0.761
AFU69391.1
Secreted protein with Por secretion system C-terminal sorting domain.
  
     0.759
AFU70159.1
Secreted protein with Por secretion system C-terminal sorting domain.
  
     0.755
AFU69884.1
Secreted hydrolase, alpha/beta family.
  
     0.697
AFU67590.1
Outer membrane assembly lipoprotein YfiO.
   
 
 0.674
AFU70108.1
Secreted protein with Por secretion system C-terminal sorting domain; Truncated by transposition.
  
     0.627
AFU69885.1
Thermitase-like protease, peptidase S8 family.
 
    0.607
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.