STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU70323.1Type I secretion outer membrane protein, TolC family. (476 aa)    
Predicted Functional Partners:
AFU69181.1
Cation/multidrug efflux membrane fusion protein, AcrA family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.926
AFU70050.1
Outer membrane RND-type efflux membrane fusion protein, NodT family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.926
AFU68637.1
Outer membrane efflux protein TolC.
  
  
 
0.917
AFU67936.1
Outer membrane efflux protein TolC.
     
  0.900
AFU68371.1
Outer membrane efflux protein TolC.
     
  0.900
AFU70052.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
     
  0.900
AFU70386.1
TolC-like type I secretion outer membrane protein with type I periplasmic ligand-binding domain.
     
 
0.900
AFU70341.1
RND-type efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.839
AFU70331.1
Acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein.
 
   0.814
AFU70326.1
Acidobacterial duplicated orphan (ADOP) ABC-type permease-like protein.
 
   0.809
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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