STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14450.1Hypothetical protein. (507 aa)    
Predicted Functional Partners:
EAR14447.1
Hypothetical protein.
 
 
   0.747
EAR14445.1
Hypothetical protein.
 
     0.668
EAR14446.1
Hypothetical protein.
 
     0.635
EAR14448.1
Putative extracytoplasmic function alternative sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.553
EAR14278.1
Na(+)-translocating NADH-quinone reductase subunit F.
  
     0.541
EAR16007.1
Hypothetical protein.
  
     0.532
EAR14449.1
Hypothetical protein.
       0.531
EAR14436.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.497
EAR15192.1
Hypothetical protein.
  
     0.472
EAR14507.1
Amidohydrolase family enzyme.
  
     0.452
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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