Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR14380.1 | EAR14452.1 | RB2501_03110 | RB2501_00211 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | iron(III) ABC transporter, periplasmic iron-binding protein. | 0.410 |
| EAR14380.1 | hisI | RB2501_03110 | RB2501_15119 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family. | 0.504 |
| EAR14380.1 | icmF | RB2501_03110 | RB2501_11102 | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.576 |
| EAR14452.1 | EAR14380.1 | RB2501_00211 | RB2501_03110 | iron(III) ABC transporter, periplasmic iron-binding protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.410 |
| EAR14452.1 | EAR14453.1 | RB2501_00211 | RB2501_00216 | iron(III) ABC transporter, periplasmic iron-binding protein. | Permease protein of iron(III) ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
| EAR14452.1 | EAR14454.1 | RB2501_00211 | RB2501_00221 | iron(III) ABC transporter, periplasmic iron-binding protein. | Putative iron transport related ATP-binding protein. | 0.996 |
| EAR14452.1 | EAR14455.1 | RB2501_00211 | RB2501_00226 | iron(III) ABC transporter, periplasmic iron-binding protein. | Probable periplasmic protein. | 0.475 |
| EAR14452.1 | EAR14456.1 | RB2501_00211 | RB2501_00231 | iron(III) ABC transporter, periplasmic iron-binding protein. | Hypothetical protein. | 0.465 |
| EAR14452.1 | EAR14617.1 | RB2501_00211 | RB2501_01036 | iron(III) ABC transporter, periplasmic iron-binding protein. | Flavodoxin, putative. | 0.443 |
| EAR14452.1 | EAR15718.1 | RB2501_00211 | RB2501_15359 | iron(III) ABC transporter, periplasmic iron-binding protein. | Hypothetical protein. | 0.628 |
| EAR14452.1 | hisI | RB2501_00211 | RB2501_15119 | iron(III) ABC transporter, periplasmic iron-binding protein. | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family. | 0.416 |
| EAR14452.1 | icmF | RB2501_00211 | RB2501_11102 | iron(III) ABC transporter, periplasmic iron-binding protein. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.567 |
| EAR14453.1 | EAR14452.1 | RB2501_00216 | RB2501_00211 | Permease protein of iron(III) ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | iron(III) ABC transporter, periplasmic iron-binding protein. | 0.999 |
| EAR14453.1 | EAR14454.1 | RB2501_00216 | RB2501_00221 | Permease protein of iron(III) ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Putative iron transport related ATP-binding protein. | 0.999 |
| EAR14453.1 | EAR14455.1 | RB2501_00216 | RB2501_00226 | Permease protein of iron(III) ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Probable periplasmic protein. | 0.461 |
| EAR14453.1 | EAR14456.1 | RB2501_00216 | RB2501_00231 | Permease protein of iron(III) ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.446 |
| EAR14454.1 | EAR14452.1 | RB2501_00221 | RB2501_00211 | Putative iron transport related ATP-binding protein. | iron(III) ABC transporter, periplasmic iron-binding protein. | 0.996 |
| EAR14454.1 | EAR14453.1 | RB2501_00221 | RB2501_00216 | Putative iron transport related ATP-binding protein. | Permease protein of iron(III) ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
| EAR14454.1 | EAR14455.1 | RB2501_00221 | RB2501_00226 | Putative iron transport related ATP-binding protein. | Probable periplasmic protein. | 0.630 |
| EAR14454.1 | EAR14456.1 | RB2501_00221 | RB2501_00231 | Putative iron transport related ATP-binding protein. | Hypothetical protein. | 0.625 |
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