STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14483.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
EAR14484.1
Hypothetical protein.
 
    0.864
EAR15753.1
Hypothetical protein.
  
     0.701
EAR14482.1
RNA polymerase sigma-70 factor, ECF subfamily protein.
       0.693
EAR16556.1
Hypothetical protein.
  
     0.650
EAR16819.1
Hypothetical protein.
  
     0.647
EAR16557.1
Hypothetical protein.
  
     0.597
EAR14753.1
Hypothetical protein.
  
     0.587
EAR15292.1
Hypothetical protein.
  
     0.587
EAR16899.1
Hypothetical protein.
  
     0.580
EAR14181.1
Elongation factor Tu; Belongs to the SecE/SEC61-gamma family.
  
     0.575
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.