STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14491.1Transcriptional regulator, MarR family protein. (155 aa)    
Predicted Functional Partners:
EAR14492.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.728
EAR15286.1
Hypothetical protein.
 
     0.608
EAR14276.1
Glycosyltransferase.
 
   
 0.549
EAR16728.1
ATP-dependent helicase.
  
    0.540
EAR16725.1
Hypothetical protein.
  
     0.535
EAR14490.1
Probable long chain fatty-acid CoA ligase.
       0.532
EAR14561.1
Hypothetical protein.
 
   
 0.529
EAR14494.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.471
EAR14495.1
acyl-CoA dehydrogenase.
 
  
 0.447
EAR14493.1
acetyl-CoA acetyltransferase.
       0.442
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.