STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14529.1Copper/Zinc superoxide dismutase. (195 aa)    
Predicted Functional Partners:
EAR14569.1
Copper-translocating P-type ATPase.
   
 0.858
EAR14498.1
Trehalose-6-phosphate synthase.
   
  
 0.684
EAR14531.1
Hypothetical protein.
       0.635
EAR14530.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.630
EAR16184.1
Hypothetical protein.
   
 0.626
EAR16202.1
Hypothetical protein.
   
 0.626
EAR16207.1
Probable copper-transporting ATPase.
   
 0.626
EAR15101.1
Copper-transporting ATPase.
   
 0.626
EAR16729.1
Superoxide dismutase, Mn family protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.609
EAR14527.1
Possible hydrolase.
       0.605
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.