STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14594.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
EAR14593.1
Short chain dehydrogenase.
 
     0.959
EAR14595.1
Hypothetical protein.
 
   
 0.950
EAR14596.1
L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase.
       0.777
EAR14592.1
Putative transcriptional regulator.
 
     0.745
EAR14597.1
Hypothetical protein.
 
     0.698
EAR14585.1
Rhamnosidase A.
 
     0.508
EAR14584.1
Hypothetical protein.
 
     0.438
EAR14598.1
Putative rhamnosidase.
 
     0.409
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.