STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14598.1Putative rhamnosidase. (1204 aa)    
Predicted Functional Partners:
EAR14589.1
Putative alpha-rhamnosidase.
 
     0.640
EAR14599.1
Probable sulfatase atsG.
 
     0.624
EAR14593.1
Short chain dehydrogenase.
 
 
 0.617
EAR15270.1
Hypothetical protein.
 
    0.561
EAR14509.1
Beta-glucosidase.
     0.549
EAR17139.1
alpha-L-arabinosidase.
  
     0.538
EAR15279.1
Sugar phosphate isomerase/epimerase.
  
     0.458
EAR14786.1
Sugar phosphate isomerase/epimerase.
  
     0.438
EAR14952.1
Probable endo-1,4-beta-xylanase B.
 
   0.431
EAR14594.1
Hypothetical protein.
 
     0.409
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.