STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14637.1Putative response regulator. (285 aa)    
Predicted Functional Partners:
EAR15817.1
Transcriptional regulator, LytR/AlgR family protein.
  
  
  0.975
EAR14636.1
Putative two-component system sensor protein histidine kinase.
 
 
 0.961
EAR15789.1
Response Regulator Receiver Signal Transduction Histidine Kinase.
  
  
  0.932
EAR14542.1
Hypothetical protein.
 
 
 0.835
EAR15919.1
ATP-binding region, ATPase-like protein.
 
 
 0.831
EAR16387.1
Signal transduction ATPase, FimS family protein.
 
 
 0.824
EAR14424.1
Two-component system response regulator protein.
  
     0.775
EAR14635.1
Hypothetical protein.
       0.456
EAR14638.1
UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase-like protein.
       0.429
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.