Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR14089.1 | EAR14090.1 | RB2501_01645 | RB2501_01650 | Hypothetical protein. | Putative transmembrane rhomboid family protein. | 0.824 |
| EAR14089.1 | EAR14091.1 | RB2501_01645 | RB2501_01655 | Hypothetical protein. | Hypothetical protein. | 0.824 |
| EAR14089.1 | EAR14093.1 | RB2501_01645 | RB2501_01665 | Hypothetical protein. | Riboflavin synthase subunit beta. | 0.822 |
| EAR14089.1 | mutL | RB2501_01645 | RB2501_01660 | Hypothetical protein. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.824 |
| EAR14090.1 | EAR14089.1 | RB2501_01650 | RB2501_01645 | Putative transmembrane rhomboid family protein. | Hypothetical protein. | 0.824 |
| EAR14090.1 | EAR14091.1 | RB2501_01650 | RB2501_01655 | Putative transmembrane rhomboid family protein. | Hypothetical protein. | 0.940 |
| EAR14090.1 | EAR14093.1 | RB2501_01650 | RB2501_01665 | Putative transmembrane rhomboid family protein. | Riboflavin synthase subunit beta. | 0.824 |
| EAR14090.1 | mutL | RB2501_01650 | RB2501_01660 | Putative transmembrane rhomboid family protein. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.854 |
| EAR14091.1 | EAR14089.1 | RB2501_01655 | RB2501_01645 | Hypothetical protein. | Hypothetical protein. | 0.824 |
| EAR14091.1 | EAR14090.1 | RB2501_01655 | RB2501_01650 | Hypothetical protein. | Putative transmembrane rhomboid family protein. | 0.940 |
| EAR14091.1 | EAR14093.1 | RB2501_01655 | RB2501_01665 | Hypothetical protein. | Riboflavin synthase subunit beta. | 0.824 |
| EAR14091.1 | mutL | RB2501_01655 | RB2501_01660 | Hypothetical protein. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.845 |
| EAR14093.1 | EAR14089.1 | RB2501_01665 | RB2501_01645 | Riboflavin synthase subunit beta. | Hypothetical protein. | 0.822 |
| EAR14093.1 | EAR14090.1 | RB2501_01665 | RB2501_01650 | Riboflavin synthase subunit beta. | Putative transmembrane rhomboid family protein. | 0.824 |
| EAR14093.1 | EAR14091.1 | RB2501_01665 | RB2501_01655 | Riboflavin synthase subunit beta. | Hypothetical protein. | 0.824 |
| EAR14093.1 | mutL | RB2501_01665 | RB2501_01660 | Riboflavin synthase subunit beta. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.824 |
| EAR15545.1 | miaA | RB2501_14494 | RB2501_15969 | Putative helicase. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.428 |
| EAR15545.1 | mutL | RB2501_14494 | RB2501_01660 | Putative helicase. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.788 |
| EAR15545.1 | polA | RB2501_14494 | RB2501_03785 | Putative helicase. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.739 |
| EAR15578.1 | EAR16037.1 | RB2501_14659 | RB2501_04045 | DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | DNA mismatch repair protein mutS. | 0.600 |
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