STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14105.1Aminoacyl-histidine dipeptidase. (487 aa)    
Predicted Functional Partners:
EAR15905.1
Gamma-glutamyltranspeptidase.
     
 0.904
EAR15562.1
Gamma-glutamyltranspeptidase.
     
 0.904
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
     
 0.904
EAR15540.1
Aminopeptidase.
     
 0.903
EAR14237.1
Aspartate aminotransferase.
 
 
  0.855
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.850
EAR14293.1
Putative aspartate aminotransferase.
   
  0.815
EAR16783.1
Cys/Met metabolism PLP-dependent enzyme superfamily protein.
    
  0.813
EAR15403.1
Cystathionine beta-lyase.
    
  0.813
EAR14106.1
Hypothetical protein.
       0.601
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.