STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14107.1Secreted enzyme, contains two amidohydrolase related domains. (982 aa)    
Predicted Functional Partners:
EAR14108.1
Predicted amidohydrolase.
    
0.982
EAR14106.1
Hypothetical protein.
       0.554
EAR14905.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain.
  
     0.545
EAR16049.1
Histidine ammonia-lyase.
  
  
 0.539
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.488
EAR17075.1
Hypothetical protein.
  
  
 0.488
EAR14109.1
Putative rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.451
EAR15142.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative.
  
     0.422
EAR14110.1
Caax prenyl protease 1.
       0.402
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.