STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14120.1TPR repeat protein. (466 aa)    
Predicted Functional Partners:
EAR14118.1
Hypothetical protein.
 
    0.617
EAR15242.1
TPR repeat protein.
 
     0.611
EAR14123.1
Putative shikimate 5-dehydrogenase.
       0.586
EAR14121.1
Predicted membrane protein.
       0.584
EAR14122.1
Hypothetical protein.
       0.584
EAR14223.1
Hypothetical protein.
  
     0.570
EAR14436.1
Putative outer membrane protein, probably involved in nutrient binding.
  
    0.566
EAR14158.1
Hypothetical protein.
  
     0.560
EAR17030.1
Hypothetical protein.
  
     0.559
EAR14219.1
Hypothetical protein.
  
     0.556
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.