STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14135.1Putative DNA polymerase III epsilon chain. (258 aa)    
Predicted Functional Partners:
EAR15838.1
Hypothetical protein.
 
  
0.923
EAR15367.1
DNA polymerase III, epsilon subunit.
 
  
 0.921
EAR14699.1
DNA polymerase III, epsilon subunit.
  
  
0.915
EAR14134.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
       0.690
EAR14132.1
Putative competence-damage inducible; Belongs to the CinA family.
       0.687
EAR14133.1
Hypothetical protein.
  
    0.660
EAR14136.1
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
       0.545
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 
 0.531
EAR15896.1
Putative plant auxin-regulated protein.
  
     0.526
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.515
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.