STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14163.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
EAR14164.1
VCBS protein.
 
     0.893
EAR14168.1
OmpA family protein.
 
     0.817
EAR16581.1
OmpA family protein.
 
     0.767
EAR14165.1
Hypothetical protein.
 
     0.756
EAR15492.1
OmpA family protein.
  
     0.753
EAR15911.1
OmpA family protein.
  
     0.751
EAR14268.1
Hypothetical protein.
  
     0.746
EAR16545.1
TPR domain protein.
  
   
 0.740
EAR14266.1
Hypothetical protein.
  
     0.734
EAR16845.1
Hypothetical protein.
  
     0.716
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.