STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14187.1comEA protein-related protein. (244 aa)    
Predicted Functional Partners:
EAR14186.2
butyryl-CoA dehydrogenase.
       0.784
EAR14188.1
Sodium/alanine symporter.
       0.718
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.657
EAR14190.1
Hypothetical protein.
       0.591
EAR16811.1
Putative amidophosphoribosyl-transferase.
 
  
 0.565
EAR14189.1
Potassium uptake protein, TrkA family.
       0.543
EAR17003.1
Putative competence related membrane protein.
 
  
 0.543
EAR16525.1
DNA processing protein DprA, putative.
 
  
 0.520
EAR16908.1
Hypothetical protein.
  
     0.515
xerC
Putative site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.473
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.