STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14192.1Thiol-disulfide isomerase/thioredoxin. (201 aa)    
Predicted Functional Partners:
EAR14193.1
Thioredoxin family protein, putative.
 
   
 0.919
EAR14191.1
Rhodanese-like domain protein.
       0.516
EAR14194.1
Probable MarR-family regulatory protein.
     
 0.515
EAR14195.1
Hypothetical protein.
       0.510
EAR14189.1
Potassium uptake protein, TrkA family.
       0.464
EAR14190.1
Hypothetical protein.
       0.464
EAR14196.1
YCE I like family protein; Belongs to the UPF0312 family.
       0.420
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.