STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14240.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
EAR14239.1
Putative RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.938
EAR16351.1
Hypothetical protein.
  
     0.761
EAR16418.1
Hypothetical protein.
  
     0.703
EAR16273.1
Hypothetical protein.
  
     0.668
EAR16870.1
Hypothetical protein.
  
     0.666
EAR16003.1
Hypothetical protein.
  
     0.662
EAR16520.1
Hypothetical protein.
  
     0.639
EAR16601.1
Hypothetical protein.
  
     0.627
EAR15493.1
Hypothetical protein.
  
     0.623
EAR14242.1
RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.621
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.