STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14278.1Na(+)-translocating NADH-quinone reductase subunit F. (118 aa)    
Predicted Functional Partners:
EAR14277.1
Thiamine biosynthesis lipoprotein apbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.797
EAR15880.1
Hypothetical protein.
  
     0.767
EAR14436.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.754
EAR14420.1
Hypothetical protein.
  
     0.745
EAR15812.1
Transaldolase.
  
     0.745
EAR16994.1
TPR domain protein.
  
     0.743
EAR16919.1
Hypothetical protein.
  
     0.737
EAR16758.1
Hypothetical protein.
  
     0.734
EAR16007.1
Hypothetical protein.
  
     0.729
EAR15201.1
Ribonuclease Z.
  
     0.729
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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