STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14288.1Delta-1-pyrroline-5-carboxylate dehydrogenase. (542 aa)    
Predicted Functional Partners:
EAR15698.1
CpmD protein involved in carbapenem biosynthesis.
 0.965
EAR15878.1
Acetylornithine aminotransferase, putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.950
EAR17100.1
Glutamate synthase (ferredoxin).
  
 
 0.938
EAR14237.1
Aspartate aminotransferase.
   
 0.914
EAR14293.1
Putative aspartate aminotransferase.
   
 0.914
EAR16784.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.911
EAR17099.1
NADPH-dependent glutamate synthase, small subunit.
   
 0.911
EAR14812.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.911
EAR14855.1
Glutamine synthetase II.
  
 
 0.909
proC
Putative pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.906
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.