STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14316.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
EAR14315.1
Oxidoreductase, GMC family protein.
 
 
 0.931
EAR16369.1
Oxidoreductase, GMC family protein.
 
 
 0.810
EAR16377.1
Oxidoreductase, GMC family protein.
 
 
 0.810
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.794
EAR17132.1
GMC oxidoreductase family protein.
 
 
 0.747
EAR15736.1
Hypothetical protein.
   
    0.628
EAR14310.1
Probable cytochrome c precursor.
 
  
 0.529
EAR14112.1
Hypothetical protein.
  
     0.521
EAR14320.1
Putative glucan-binding protein D; BglB-like protein.
  
     0.497
EAR17047.1
Putative dehydrogenase-like protein.
 
    0.483
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.