Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR14320.1Putative glucan-binding protein D; BglB-like protein. (445 aa)    
Predicted Functional Partners:
EAR17045.1
Probable transporter.
  
     0.636
EAR17044.1
Malonate/sodium symporter MadM subunit.
  
     0.628
EAR14112.1
Hypothetical protein.
  
     0.617
EAR14319.1
Putative NADH dehydrogenase.
       0.538
EAR14316.1
Hypothetical protein.
  
     0.497
EAR17046.1
Probable long chain fatty acid CoA ligase.
  
     0.450
EAR15274.1
Hypothetical protein.
  
     0.434
EAR14509.1
Beta-glucosidase.
 
     0.432
EAR14833.1
Hypothetical protein.
  
     0.424
EAR14502.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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