Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR14370.1Prephenate dehydratase. (276 aa)    
Predicted Functional Partners:
EAR14367.1
Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase.
 
 0.999
EAR14293.1
Putative aspartate aminotransferase.
 
 
 0.990
EAR14368.1
Prephenate dehydrogenase.
 
 
 0.989
EAR14237.1
Aspartate aminotransferase.
 
 
 0.945
hisC
Putative histidine biosynthesis-related aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.926
EAR16138.1
Histidinol-phosphate aminotransferase.
  
 
 0.916
EAR15522.1
Histidinol-phosphate aminotransferase.
  
 
 0.916
EAR17073.1
Hypothetical protein.
     
 0.911
EAR14369.1
Putative aminotransferase.
  
 0.904
EAR14726.1
2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family.
 
 
    0.904
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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