STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14372.1ABC-type multidrug transport system, ATPase component. (303 aa)    
Predicted Functional Partners:
EAR15361.1
Probable permease of ABC transporter.
 
 
 0.915
EAR15360.1
Hypothetical protein.
 
  
 0.840
EAR14973.1
Probable ATP-binding component of ABC transporter.
   
0.755
EAR17164.1
Putative ABC amino acid transport system, ATP-binding protein.
    
0.709
lolD-2
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
0.593
EAR16845.1
Hypothetical protein.
  
   
 0.590
EAR17153.1
Lipoprotein, putative.
  
   
 0.580
EAR14371.1
Hypothetical protein.
       0.566
EAR16316.1
Hypothetical protein.
  
 
 0.562
EAR16318.1
Putative copper-binding periplasmic protein.
 
 
 0.535
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.