STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14382.1uroporphyrin-III C-methyltransferase. (195 aa)    
Predicted Functional Partners:
EAR14383.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
EAR14384.1
Probable sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.973
EAR14381.1
Thioredoxin reductase.
     
 0.804
EAR14385.1
Possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase.
 
  
 0.802
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
   
 0.723
EAR14380.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.623
EAR14388.1
Bifunctional aspartokinase I/homeserine dehydrogenase I.
 
   
 0.614
EAR16431.1
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.609
EAR16426.1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
   
 0.546
EAR14386.1
Transcriptional regulator, BadM/Rrf2 family protein.
 
     0.492
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.