Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR14404.1Isoamylase protein-like protein. (98 aa)    
Predicted Functional Partners:
EAR14345.1
Glycogen phosphorylase.
  
 
 0.763
EAR16823.1
Glycogen synthase-related protein.
  
  
 0.679
EAR17230.1
Glycogen synthase.
  
  
 0.679
EAR14498.1
Trehalose-6-phosphate synthase.
  
 
 0.636
EAR15618.1
Trehalose synthase.
  
  
 0.632
EAR16839.1
Predicted glycogen debranching enzyme.
 
 
 0.627
EAR16950.1
Putative glycosidase.
 
  
 0.618
EAR14580.1
alpha-L-rhamnosidase (putative).
  
 
 0.579
EAR14589.1
Putative alpha-rhamnosidase.
  
 
 0.579
EAR14643.1
Mannosyltransferase.
   
 0.485
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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