STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR14409.1Cationic outer membrane protein OmpH. (157 aa)    
Predicted Functional Partners:
EAR14411.1
Putative outer membrane protein.
 
  
 0.870
EAR14410.1
Outer membrane protein OmpH, putative.
 
     0.825
EAR14095.1
Hypothetical protein.
  
  
 0.746
EAR14299.1
Hypothetical protein.
 
  
 0.745
EAR15851.1
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.712
EAR16993.1
Putative outer membrane protein.
  
     0.688
EAR14084.1
Hypothetical protein.
  
     0.679
EAR15980.1
Hypothetical protein.
  
     0.661
EAR16810.1
Hypothetical protein.
  
     0.659
EAR14753.1
Hypothetical protein.
  
     0.642
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.