STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15896.1Putative plant auxin-regulated protein. (509 aa)    
Predicted Functional Partners:
EAR16898.1
Possible uroporphyrinogen-III synthase.
  
     0.749
EAR15895.1
Transcriptional regulator (AraC family) protein.
       0.741
EAR15380.1
Hypothetical protein.
  
     0.715
EAR15851.1
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.667
EAR15713.1
Hypothetical protein.
 
 
 
 0.647
EAR15550.1
Hypothetical protein.
  
     0.639
EAR14906.1
Hypothetical protein.
  
     0.604
EAR15897.1
Hypothetical protein.
       0.602
EAR14948.1
Hypothetical protein.
  
     0.591
EAR14248.1
Hypothetical protein.
  
     0.570
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.