Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR15924.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
EAR16556.1
Hypothetical protein.
  
     0.757
EAR16545.1
TPR domain protein.
  
     0.748
EAR16758.1
Hypothetical protein.
  
     0.744
EAR14445.1
Hypothetical protein.
  
     0.738
EAR16899.1
Hypothetical protein.
  
     0.738
EAR14413.1
Inorganic polyphosphate/ATP-NAD kinase.
  
     0.734
EAR15973.1
Translation initiation factor IF-2.
  
     0.728
EAR14752.1
Hypothetical protein.
  
     0.721
EAR15292.1
Hypothetical protein.
  
     0.705
EAR16819.1
Hypothetical protein.
  
     0.702
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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