STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15938.1Putative ABC transporter. (414 aa)    
Predicted Functional Partners:
EAR15935.1
ABC transporter ATP-binding protein.
 
 0.991
EAR14514.1
Putative ABC transport system, ATP-binding protein.
 
 0.975
EAR14517.1
ABC transporter, ATP-binding protein.
 
 0.974
lolD-2
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.952
lolD
ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.951
EAR14973.1
Probable ATP-binding component of ABC transporter.
 
 0.949
EAR15936.1
Putative transport/efflux component protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.931
EAR14732.1
Putative ATP-binding protein involved in cell division.
 
      0.899
EAR15932.1
Membrane fusion efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.897
EAR15937.1
ABC transporter, permease protein, putative.
 
    
0.731
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.