STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15939.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
EAR15942.1
Hypothetical protein.
 
     0.859
EAR15940.1
Hypothetical protein.
 
     0.858
EAR15941.1
Hypothetical protein.
       0.824
EAR15945.1
Cytochrome c oxidase subunit III.
 
     0.548
EAR14551.1
Hypothetical protein.
  
     0.544
EAR15938.1
Putative ABC transporter.
       0.523
EAR15937.1
ABC transporter, permease protein, putative.
       0.467
EAR16042.1
Hypothetical protein.
  
     0.453
EAR17006.1
Hypothetical protein.
  
     0.433
EAR15936.1
Putative transport/efflux component protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.403
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.