STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR15987.1Hypothetical protein. (383 aa)    
Predicted Functional Partners:
EAR15986.1
Putative TonB-dependent outer membrane receptor protein.
 
     0.941
EAR15518.1
Hypothetical protein.
  
     0.754
EAR15519.1
Hypothetical protein.
 
     0.731
EAR15517.1
Putative TonB-dependent outer membrane receptor protein.
 
     0.660
EAR15988.1
Putative membrane associated hydrolase.
 
     0.651
EAR14641.1
Polysaccharide biosynthesis protein.
  
     0.615
EAR15271.1
Hypothetical protein.
  
     0.593
EAR14932.1
Fibronectin, type III.
  
     0.465
EAR15086.1
Hypothetical protein.
  
     0.452
EAR14931.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.