STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16045.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
ruvC
Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.789
EAR14436.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.718
EAR15556.1
Aminopeptidase N.
  
     0.712
EAR15942.1
Hypothetical protein.
  
     0.698
EAR14181.1
Elongation factor Tu; Belongs to the SecE/SEC61-gamma family.
  
     0.690
EAR14734.1
Putative TonB-dependent receptor.
  
     0.684
EAR16710.1
Hypothetical protein.
  
     0.678
EAR14158.1
Hypothetical protein.
  
     0.674
EAR17031.1
Hypothetical protein.
  
     0.669
EAR15697.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.