STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16057.1Probable cation-transporting P-type ATPase. (805 aa)    
Predicted Functional Partners:
EAR16059.1
Probable cytochrome oxidase subunit (cbb3-type); Belongs to the heme-copper respiratory oxidase family.
 
   
 0.941
EAR16061.1
Cytochrome-c oxidase fixP chain.
 
     0.922
EAR16058.1
Hypothetical protein.
 
  
 0.915
EAR16062.1
Iron-sulfur cluster-binding protein.
 
  
 0.898
EAR16063.1
Hypothetical protein.
 
   
 0.893
EAR16064.1
Uncharacterized protein; Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible.
 
   
 0.861
EAR16060.1
Hypothetical protein.
 
     0.772
EAR16056.1
Transcriptional regulatory protein.
 
     0.743
EAR16067.1
Coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.725
EAR14569.1
Copper-translocating P-type ATPase.
 
 
0.612
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.