STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16069.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
EAR16070.1
Putative desulfatase possibly for mucin.
     0.985
EAR14480.1
Phosphoglucomutase phosphomannomutase.
 
  
 0.648
EAR16560.1
Probable nucleotide sugar dehydrogenase.
  
 
 0.614
EAR16068.1
Oxidoreductase, Gfo/Idh/MocA family protein.
 
     0.607
EAR16731.1
Amidophosphoribosyltransferase.
 
   
 0.511
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.479
EAR14498.1
Trehalose-6-phosphate synthase.
     
 0.465
EAR16067.1
Coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
 
 0.434
EAR14648.1
Tyrosine-protein kinase ptk.
     
 0.412
EAR15343.1
Tyrosine-protein kinase.
     
 0.412
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.