STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16081.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
EAR15734.1
Hypothetical protein.
 
  
 0.791
EAR15288.1
Hypothetical protein.
 
    0.781
EAR15680.1
Hypothetical protein.
 
     0.781
EAR15124.1
Hypothetical protein.
  
     0.768
EAR16593.1
Hypothetical protein.
  
     0.766
EAR16228.1
Tetratricopeptide repeat domain protein.
 
    0.764
EAR15013.1
Methanol dehydrogenase regulator.
 
  
 0.721
EAR16752.1
BatA (Bacteroides aerotolerance operon).
 
  
 0.696
EAR16751.1
Hypothetical protein.
 
  
 0.688
EAR17123.1
moxR protein.
 
  
 0.579
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.