STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16085.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
EAR16086.1
Hypothetical protein.
  
    0.785
EAR16111.1
Integrase.
  
   
 0.722
EAR16082.1
Hypothetical protein.
 
 
 
 0.627
EAR16728.1
ATP-dependent helicase.
  
 
 0.554
EAR16686.1
Putative TonB-linked outer membrane protein.
  
     0.526
EAR16201.1
NHL repeat protein.
  
     0.517
EAR16087.1
Hypothetical protein.
       0.492
EAR16088.1
Hypothetical protein.
       0.486
EAR14046.1
Hypothetical protein.
  
 
 0.446
EAR16687.1
Putative outer membrane protein probably involved in nutrient binding.
  
    0.425
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.