STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16118.1Hypothetical protein. (448 aa)    
Predicted Functional Partners:
EAR16117.1
Hypothetical protein.
       0.774
EAR16119.1
Hypothetical protein.
       0.773
EAR16120.1
Hypothetical protein.
       0.581
EAR16004.1
Putative biopolymer transport protein.
  
 
 0.529
EAR17104.1
Putative biopolymer transport protein.
  
 
 0.529
EAR14168.1
OmpA family protein.
   
 
 0.511
EAR16581.1
OmpA family protein.
   
 
 0.511
EAR16001.1
Hypothetical protein.
  
 
 0.501
EAR16002.1
Hypothetical protein.
  
 
 0.501
EAR17105.1
Putative tansport related protein.
  
 
 0.501
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.