Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR16137.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
EAR16138.1
Histidinol-phosphate aminotransferase.
 
     0.934
EAR15953.1
Putative NADP-dependent malic enzyme.
  
  
 0.795
EAR14597.1
Hypothetical protein.
  
     0.689
EAR15522.1
Histidinol-phosphate aminotransferase.
 
     0.684
EAR14813.1
Hypothetical protein.
  
     0.606
EAR14595.1
Hypothetical protein.
 
     0.593
EAR14311.1
Hypothetical protein.
  
     0.529
EAR14904.1
Phospholipid/glycerol acyltransferase.
  
    0.480
EAR14310.1
Probable cytochrome c precursor.
 
     0.437
EAR16139.1
DNA polymerase III alpha subunit.
       0.418
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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