Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR16147.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EAR16146.1
Hypothetical protein.
 
     0.953
EAR16148.1
Hypothetical protein.
 
  
 0.849
EAR16174.1
Copper resistance protein CopA.
   
 
 0.746
EAR16141.1
Probable transmembrane protein.
 
     0.621
folE-2
GTP cyclohydrolase I.
       0.613
EAR16144.1
Putative flavodoxin reductase.
 
     0.583
EAR16111.1
Integrase.
  
     0.541
EAR16143.1
RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.505
EAR16082.1
Hypothetical protein.
  
  
 0.438
EAR17072.1
Hypothetical protein.
  
     0.436
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.