STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16226.1Gamma-glutamyl carboxylase-like protein. (441 aa)    
Predicted Functional Partners:
EAR16225.1
Riboflavin biosynthesis protein RibF.
     
 0.806
EAR16925.1
Hypothetical protein.
  
     0.610
EAR16227.1
seryl-tRNA synthetase.
       0.589
EAR16936.1
Hypothetical protein.
  
     0.575
EAR16229.1
Hypothetical protein.
 
     0.526
EAR14503.1
Aminopeptidase M1 family protein.
  
   
 0.479
EAR16224.1
Hypothetical protein.
  
    0.476
EAR14609.1
Hypothetical protein.
  
     0.462
EAR14418.1
Hypothetical protein.
 
     0.459
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
  
 0.436
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.